PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_007775-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family AP2
Protein Properties Length: 488aa    MW: 55387.9 Da    PI: 4.9285
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_007775-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.7e-1297153155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s y+GV++++++gr++A+++d  s+n+ ++k+ + g ++++ +Aa+ ++ a++k++g
  AHYPO_007775-RA  97 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQNKKGRQGAYDSEADAARTYDLAALKYWG 153
                      57*******************7777**99988888*****99*************98 PP

2AP249.88.5e-16196247155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GV +++ +grW+A+I   +   g +k+ +lg+f + eeAa+a+++a+ +++g
  AHYPO_007775-RA 196 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFSSQEEAAEAYDRAAIEYRG 247
                      89****99**********99966...3.6*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512577135No hitNo description
SuperFamilySSF541714.9E-1497162IPR016177DNA-binding domain
CDDcd000181.17E-1797162No hitNo description
PfamPF008474.7E-997153IPR001471AP2/ERF domain
SMARTSM003805.5E-1898167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-1198162IPR001471AP2/ERF domain
PROSITE profilePS5103217.76798161IPR001471AP2/ERF domain
PRINTSPR003676.2E-699110IPR001471AP2/ERF domain
CDDcd000181.13E-25196257No hitNo description
SuperFamilySSF541713.27E-17196257IPR016177DNA-binding domain
PfamPF008472.8E-11196247IPR001471AP2/ERF domain
PROSITE profilePS5103218.294197255IPR001471AP2/ERF domain
SMARTSM003805.4E-27197261IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-17197255IPR001471AP2/ERF domain
PRINTSPR003676.2E-6237257IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006110Biological Processregulation of glycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0019432Biological Processtriglyceride biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MKRKSNLFKS STITNLESCI TSSSPSSSSS SSSSCVVDDH NNHNHIINTT NNNNFEDEEE  60
KPPKPKKIRT KRASINDLKS QKCSNANANR PTNRRSSIYR GVTRHRWTGR FEAHLWDKSS  120
WNNIQNKKGR QGAYDSEADA ARTYDLAALK YWGPETTLNF PIEKYTKELE EMQNASKEEY  180
LASLRRRSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTFSS QEEAAEAYDR  240
AAIEYRGVNA VTNFDISNYV GRCKNLMPKD ESEQSNPKQA KTVSLQKLQQ VKVQKSEEQE  300
DQPVVILQPE LLEQVDEPDM VDQVDERVHP NLADIEDEKR NEVKGPSQLE EEPKLIDSID  360
HPSMLVGMNG PEDERENPWD FCMDPGGYDP FLVSNIPFEE DAKWHDLYNQ MGFEENIARF  420
FEGEAESLID NIEGSYFDGT EVMDSSNGSK TIEDLDKKIE ILPKTEENSL SFSSSSPSST  480
STTTSLE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010694876.10.0PREDICTED: ethylene-responsive transcription factor WRI1
SwissprotQ6X5Y61e-109WRI1_ARATH; Ethylene-responsive transcription factor WRI1
TrEMBLA0A0J8E4K10.0A0A0J8E4K1_BETVU; Uncharacterized protein
STRINGBra007066.1-P1e-110(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-87AP2 family protein